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harmony - Fast, Sensitive, and Accurate Integration of Single Cell Data

Implementation of the Harmony algorithm for single cell integration, described in Patikas, Yao, et al. <doi:10.64898/2026.03.16.711825>. Package includes a standalone Harmony function and interfaces to external frameworks.

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algorithmdata-integrationscrna-seqopenblascpp

15.17 score 650 stars 11 dependents 11k scripts 22k downloads